Difference between revisions of "Config:DataSource"

From SUMOwiki
Jump to navigationJump to search
m
m
Line 4: Line 4:
 
Evaluate samples locally using a native executable/script or a java class
 
Evaluate samples locally using a native executable/script or a java class
 
<source lang="xml">
 
<source lang="xml">
<[[Config:SampleEvaluator|SampleEvaluator]] id="local" type="ibbt.sumo.SampleEvaluators.LocalSampleEvaluator">
+
<[[Config:SampleEvaluator|SampleEvaluator]] id="local" type="ibbt.sumo.SampleEvaluators.LocalSampleEvaluator"><!-- Maximum number of times to resubmit a point (e.g., in case something went wrong) -->
   <Option key="maxResubmissions" value="1"/>
+
   <Option key="maxResubmissions" value="1"/><!-- If a sample takes longer than "sampleTimeout*average evaluation time of one sample"
   <Option key="sampleTimeout" value="-1"/>
+
seconds to evaluate it is removed from the pending list (set to -1 to disable) -->
   <Option key="simulatorType" value=""/>
+
   <Option key="sampleTimeout" value="-1"/><!-- Can be set to "java" for java executables, to "external" for platform-specific
 +
    binaries and to nothing at all for auto-detection.-->
 +
   <Option key="simulatorType" value=""/><!-- Can be set to a number of seconds, if one simulator evaluation exceeds this timeout,
 +
    the simulation is aborted --><!-- <Option key="timeout" value="12"/> --><!-- Number of samples to evaluate concurrently, useful if you have a dual or multi-core machine -->
 
   <Option key="threadCount" value="1"/>
 
   <Option key="threadCount" value="1"/>
 
</[[Config:SampleEvaluator|SampleEvaluator]]>
 
</[[Config:SampleEvaluator|SampleEvaluator]]>
Line 14: Line 17:
 
Evaluate samples using a matlab script (ie. your simulator is a matlab script)
 
Evaluate samples using a matlab script (ie. your simulator is a matlab script)
 
<source lang="xml">
 
<source lang="xml">
<[[Config:SampleEvaluator|SampleEvaluator]] id="matlab" type="ibbt.sumo.SampleEvaluators.matlab.MatlabSampleEvaluator">
+
<[[Config:SampleEvaluator|SampleEvaluator]] id="matlab" type="ibbt.sumo.SampleEvaluators.matlab.MatlabSampleEvaluator"><!-- Maximum number of times to resubmit a point (e.g., in case something went wrong) -->
   <Option key="maxResubmissions" value="1"/>
+
   <Option key="maxResubmissions" value="1"/><!-- If a sample takes longer than "sampleTimeout*average evaluation time of one sample"
 +
seconds to evaluate it is removed from the pending list (set to -1 to disable) -->
 
   <Option key="sampleTimeout" value="-1"/>
 
   <Option key="sampleTimeout" value="-1"/>
 
</[[Config:SampleEvaluator|SampleEvaluator]]>
 
</[[Config:SampleEvaluator|SampleEvaluator]]>
Line 22: Line 26:
 
Evaluate samples using a matlab class
 
Evaluate samples using a matlab class
 
<source lang="xml">
 
<source lang="xml">
<[[Config:SampleEvaluator|SampleEvaluator]] id="matlabClass" type="ibbt.sumo.SampleEvaluators.matlab.MatlabClassSampleEvaluator">
+
<[[Config:SampleEvaluator|SampleEvaluator]] id="matlabClass" type="ibbt.sumo.SampleEvaluators.matlab.MatlabClassSampleEvaluator"><!-- Maximum number of times to resubmit a point (e.g., in case something went wrong) -->
   <Option key="maxResubmissions" value="1"/>
+
   <Option key="maxResubmissions" value="1"/><!-- If a sample takes longer than "sampleTimeout*average evaluation time of one sample"
 +
    seconds to evaluate it is removed from the pending list (set to -1 to disable) -->
 
   <Option key="sampleTimeout" value="-1"/>
 
   <Option key="sampleTimeout" value="-1"/>
 
</[[Config:SampleEvaluator|SampleEvaluator]]>
 
</[[Config:SampleEvaluator|SampleEvaluator]]>
Line 30: Line 35:
 
Evaluate samples using a gridded dataset
 
Evaluate samples using a gridded dataset
 
<source lang="xml">
 
<source lang="xml">
<[[Config:SampleEvaluator|SampleEvaluator]] id="gridded" type="ibbt.sumo.SampleEvaluators.datasets.GriddedDatasetSampleEvaluator"></[[Config:SampleEvaluator|SampleEvaluator]]>
+
<[[Config:SampleEvaluator|SampleEvaluator]] id="gridded" type="ibbt.sumo.SampleEvaluators.datasets.GriddedDatasetSampleEvaluator"><!-- Using an ID you can specify which dataset from the simulator file to use --><!-- <Option key="id" value="someDataset"/> --></[[Config:SampleEvaluator|SampleEvaluator]]>
 
</source>
 
</source>
 
=== scattered ===
 
=== scattered ===
 
Evaluate samples using a scattered dataset
 
Evaluate samples using a scattered dataset
 
<source lang="xml">
 
<source lang="xml">
<[[Config:SampleEvaluator|SampleEvaluator]] id="scattered" type="ibbt.sumo.SampleEvaluators.datasets.ScatteredDatasetSampleEvaluator"></[[Config:SampleEvaluator|SampleEvaluator]]>
+
<[[Config:SampleEvaluator|SampleEvaluator]] id="scattered" type="ibbt.sumo.SampleEvaluators.datasets.ScatteredDatasetSampleEvaluator"><!-- Using an ID you can specify which dataset from the simulator file to use --><!-- <Option key="id" value="someDataset"/> --></[[Config:SampleEvaluator|SampleEvaluator]]>
 
</source>
 
</source>
 
=== calcua ===
 
=== calcua ===
 
Evaluate samples on a SGE administered cluster through a remote, ssh reachable frontnode
 
Evaluate samples on a SGE administered cluster through a remote, ssh reachable frontnode
 
<source lang="xml">
 
<source lang="xml">
<[[Config:SampleEvaluator|SampleEvaluator]] id="calcua" type="ibbt.sumo.SampleEvaluators.sge.RemoteSGESampleEvaluator">
+
<[[Config:SampleEvaluator|SampleEvaluator]] id="calcua" type="ibbt.sumo.SampleEvaluators.sge.RemoteSGESampleEvaluator"><!-- Maximum number of times to resubmit a point (e.g., in case something went wrong) -->
   <Option key="maxResubmissions" value="1"/>
+
   <Option key="maxResubmissions" value="1"/><!-- If a sample takes longer than "sampleTimeout*average evaluation time of one sample"
   <Option key="sampleTimeout" value="-1"/>
+
    seconds to evaluate it is removed from the pending list (set to -1 to disable) -->
 +
   <Option key="sampleTimeout" value="-1"/><!--The platform specs of the cluster-->
 
   <[[Config:Executable|Executable]] platform="unix" arch="x86"/>
 
   <[[Config:Executable|Executable]] platform="unix" arch="x86"/>
   <[[Config:Backend|Backend]] id="remoteSGE" type="ibbt.sumo.SampleEvaluators.sge.RemoteSGEBackend">
+
   <[[Config:Backend|Backend]] id="remoteSGE" type="ibbt.sumo.SampleEvaluators.sge.RemoteSGEBackend"><!--ssh user name to login on the front node-->
       <Option key="user" value="dgorisse"/>
+
       <Option key="user" value="dgorisse"/><!--Submissions happen from this front node, you need to have key-based ssh authentication-->
       <Option key="frontNode" value="submit.calcua.ua.ac.be"/>
+
       <Option key="frontNode" value="submit.calcua.ua.ac.be"/><!--Directory on the front node where input/output files, dependencies, etc. are stored-->
       <Option key="remoteDirectory" value="/storeA/users/dgorisse/output"/>
+
       <Option key="remoteDirectory" value="/storeA/users/dgorisse/output"/><!--poll for result files every xx seconds-->
       <Option key="pollInterval" value="20"/>
+
       <Option key="pollInterval" value="20"/><!--queues we can submit to-->
       <Option key="queues" value="testqueue,normalprio,myrinet,cmpl_wis-inf"/>
+
       <Option key="queues" value="testqueue,normalprio,myrinet,cmpl_wis-inf"/><!--check for faster queues (more slots available) every xx seconds-->
       <Option key="queueRevisionRate" value="10"/>
+
       <Option key="queueRevisionRate" value="10"/><!--script on the frontnode that sets up the necessary shell environment-->
 
       <Option key="environmentCommand" value=". ~/.profile;"/>
 
       <Option key="environmentCommand" value=". ~/.profile;"/>
 
   </[[Config:Backend|Backend]]>
 
   </[[Config:Backend|Backend]]>
Line 58: Line 64:
 
Evaluate samples on a LCG administered grid through a remote, ssh reachable frontnode
 
Evaluate samples on a LCG administered grid through a remote, ssh reachable frontnode
 
<source lang="xml">
 
<source lang="xml">
<[[Config:SampleEvaluator|SampleEvaluator]] id="begrid" type="ibbt.sumo.SampleEvaluators.edg.RemoteEDGSampleEvaluator">
+
<[[Config:SampleEvaluator|SampleEvaluator]] id="begrid" type="ibbt.sumo.SampleEvaluators.edg.RemoteEDGSampleEvaluator"><!-- Maximum number of times to resubmit a point (e.g., in case something went wrong) -->
   <Option key="maxResubmissions" value="1"/>
+
   <Option key="maxResubmissions" value="1"/><!-- If a sample takes longer than "sampleTimeout*average evaluation time of one sample"
 +
    seconds to evaluate it is removed from the pending list (set to -1 to disable) -->
 
   <Option key="sampleTimeout" value="-1"/>
 
   <Option key="sampleTimeout" value="-1"/>
 
   <[[Config:Executable|Executable]] platform="unix" arch="x86"/>
 
   <[[Config:Executable|Executable]] platform="unix" arch="x86"/>
Line 66: Line 73:
 
       <Option key="frontNode" value="ui01.cmi.ua.ac.be"/>
 
       <Option key="frontNode" value="ui01.cmi.ua.ac.be"/>
 
       <Option key="remoteDirectory" value="/home/edp/dgorissen/JobOutput"/>
 
       <Option key="remoteDirectory" value="/home/edp/dgorissen/JobOutput"/>
       <Option key="pollInterval" value="25"/>
+
       <Option key="pollInterval" value="25"/><!--Virtual Organization to use-->
       <Option key="vo" value="betest"/>
+
       <Option key="vo" value="betest"/><!--script on the frontnode that sets up the necessary shell environment-->
 
       <Option key="environmentCommand" value=". /etc/profile;"/>
 
       <Option key="environmentCommand" value=". /etc/profile;"/>
 
   </[[Config:Backend|Backend]]>
 
   </[[Config:Backend|Backend]]>
 
</[[Config:SampleEvaluator|SampleEvaluator]]>
 
</[[Config:SampleEvaluator|SampleEvaluator]]>
 
</source>
 
</source>

Revision as of 10:17, 8 February 2008

SampleEvaluator

local

Evaluate samples locally using a native executable/script or a java class

<[[Config:SampleEvaluator|SampleEvaluator]] id="local" type="ibbt.sumo.SampleEvaluators.LocalSampleEvaluator"><!-- Maximum number of times to resubmit a point (e.g., in case something went wrong) -->
   <Option key="maxResubmissions" value="1"/><!-- If a sample takes longer than "sampleTimeout*average evaluation time of one sample" 
		seconds to evaluate it is removed from the pending list (set to -1 to disable) -->
   <Option key="sampleTimeout" value="-1"/><!-- Can be set to "java" for java executables, to "external" for platform-specific
    binaries and to nothing at all for auto-detection.-->
   <Option key="simulatorType" value=""/><!-- Can be set to a number of seconds, if one simulator evaluation exceeds this timeout,
    the simulation is aborted --><!-- <Option key="timeout" value="12"/> --><!-- Number of samples to evaluate concurrently, useful if you have a dual or multi-core machine -->
   <Option key="threadCount" value="1"/>
</[[Config:SampleEvaluator|SampleEvaluator]]>

matlab

Evaluate samples using a matlab script (ie. your simulator is a matlab script)

<[[Config:SampleEvaluator|SampleEvaluator]] id="matlab" type="ibbt.sumo.SampleEvaluators.matlab.MatlabSampleEvaluator"><!-- Maximum number of times to resubmit a point (e.g., in case something went wrong) -->
   <Option key="maxResubmissions" value="1"/><!-- If a sample takes longer than "sampleTimeout*average evaluation time of one sample" 
		seconds to evaluate it is removed from the pending list (set to -1 to disable) -->
   <Option key="sampleTimeout" value="-1"/>
</[[Config:SampleEvaluator|SampleEvaluator]]>

matlabClass

Evaluate samples using a matlab class

<[[Config:SampleEvaluator|SampleEvaluator]] id="matlabClass" type="ibbt.sumo.SampleEvaluators.matlab.MatlabClassSampleEvaluator"><!-- Maximum number of times to resubmit a point (e.g., in case something went wrong) -->
   <Option key="maxResubmissions" value="1"/><!-- If a sample takes longer than "sampleTimeout*average evaluation time of one sample" 
    seconds to evaluate it is removed from the pending list (set to -1 to disable) -->
   <Option key="sampleTimeout" value="-1"/>
</[[Config:SampleEvaluator|SampleEvaluator]]>

gridded

Evaluate samples using a gridded dataset

<[[Config:SampleEvaluator|SampleEvaluator]] id="gridded" type="ibbt.sumo.SampleEvaluators.datasets.GriddedDatasetSampleEvaluator"><!-- Using an ID you can specify which dataset from the simulator file to use --><!-- <Option key="id" value="someDataset"/> --></[[Config:SampleEvaluator|SampleEvaluator]]>

scattered

Evaluate samples using a scattered dataset

<[[Config:SampleEvaluator|SampleEvaluator]] id="scattered" type="ibbt.sumo.SampleEvaluators.datasets.ScatteredDatasetSampleEvaluator"><!-- Using an ID you can specify which dataset from the simulator file to use --><!-- <Option key="id" value="someDataset"/> --></[[Config:SampleEvaluator|SampleEvaluator]]>

calcua

Evaluate samples on a SGE administered cluster through a remote, ssh reachable frontnode

<[[Config:SampleEvaluator|SampleEvaluator]] id="calcua" type="ibbt.sumo.SampleEvaluators.sge.RemoteSGESampleEvaluator"><!-- Maximum number of times to resubmit a point (e.g., in case something went wrong) -->
   <Option key="maxResubmissions" value="1"/><!-- If a sample takes longer than "sampleTimeout*average evaluation time of one sample" 
    seconds to evaluate it is removed from the pending list (set to -1 to disable) -->
   <Option key="sampleTimeout" value="-1"/><!--The platform specs of the cluster-->
   <[[Config:Executable|Executable]] platform="unix" arch="x86"/>
   <[[Config:Backend|Backend]] id="remoteSGE" type="ibbt.sumo.SampleEvaluators.sge.RemoteSGEBackend"><!--ssh user name to login on the front node-->
      <Option key="user" value="dgorisse"/><!--Submissions happen from this front node, you need to have key-based ssh authentication-->
      <Option key="frontNode" value="submit.calcua.ua.ac.be"/><!--Directory on the front node where input/output files, dependencies, etc. are stored-->
      <Option key="remoteDirectory" value="/storeA/users/dgorisse/output"/><!--poll for result files every xx seconds-->
      <Option key="pollInterval" value="20"/><!--queues we can submit to-->
      <Option key="queues" value="testqueue,normalprio,myrinet,cmpl_wis-inf"/><!--check for faster queues (more slots available) every xx seconds-->
      <Option key="queueRevisionRate" value="10"/><!--script on the frontnode that sets up the necessary shell environment-->
      <Option key="environmentCommand" value=". ~/.profile;"/>
   </[[Config:Backend|Backend]]>
</[[Config:SampleEvaluator|SampleEvaluator]]>

begrid

Evaluate samples on a LCG administered grid through a remote, ssh reachable frontnode

<[[Config:SampleEvaluator|SampleEvaluator]] id="begrid" type="ibbt.sumo.SampleEvaluators.edg.RemoteEDGSampleEvaluator"><!-- Maximum number of times to resubmit a point (e.g., in case something went wrong) -->
   <Option key="maxResubmissions" value="1"/><!-- If a sample takes longer than "sampleTimeout*average evaluation time of one sample" 
    seconds to evaluate it is removed from the pending list (set to -1 to disable) -->
   <Option key="sampleTimeout" value="-1"/>
   <[[Config:Executable|Executable]] platform="unix" arch="x86"/>
   <[[Config:Backend|Backend]] id="remoteEDG" type="ibbt.sumo.SampleEvaluators.edg.RemoteEDGBackend">
      <Option key="user" value="dgorissen"/>
      <Option key="frontNode" value="ui01.cmi.ua.ac.be"/>
      <Option key="remoteDirectory" value="/home/edp/dgorissen/JobOutput"/>
      <Option key="pollInterval" value="25"/><!--Virtual Organization to use-->
      <Option key="vo" value="betest"/><!--script on the frontnode that sets up the necessary shell environment-->
      <Option key="environmentCommand" value=". /etc/profile;"/>
   </[[Config:Backend|Backend]]>
</[[Config:SampleEvaluator|SampleEvaluator]]>