Difference between revisions of "Config:SequentialDesign"
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+ | '''Generated for SUMO toolbox version 7.0'''. | ||
+ | ''We are well aware that documentation is not always complete and possibly even out of date in some cases. We try to document everything as best we can but much is limited by available time and manpower. We are are a university research group after all. The most up to date documentation can always be found (if not here) in the default.xml configuration file and, of course, in the source files. If something is unclear please dont hesitate to [[Reporting problems|ask]].'' | ||
== SampleSelector == | == SampleSelector == | ||
=== empty === | === empty === | ||
− | + | Don't select any new samples, useful when modeling multiple outputs, and you don't want to involve one of these outputs in the sampling process. | |
<source xmlns:saxon="http://icl.com/saxon" lang="xml"> | <source xmlns:saxon="http://icl.com/saxon" lang="xml"> | ||
<[[Config:SampleSelector|SampleSelector]] type="[[SampleSelector#EmptySampleSelector|EmptySampleSelector]]" combineOutputs="false"/> | <[[Config:SampleSelector|SampleSelector]] type="[[SampleSelector#EmptySampleSelector|EmptySampleSelector]]" combineOutputs="false"/> | ||
</source> | </source> | ||
=== random === | === random === | ||
− | + | Selects new samples randomly in the design space. | |
<source xmlns:saxon="http://icl.com/saxon" lang="xml"> | <source xmlns:saxon="http://icl.com/saxon" lang="xml"> | ||
<[[Config:SampleSelector|SampleSelector]] type="[[SampleSelector#RandomSampleSelector|RandomSampleSelector]]" combineOutputs="false"/> | <[[Config:SampleSelector|SampleSelector]] type="[[SampleSelector#RandomSampleSelector|RandomSampleSelector]]" combineOutputs="false"/> | ||
</source> | </source> | ||
− | === | + | === delaunay === |
− | + | This sample selector uses a Delaunay triangulation of the data to select samples in locations far from previous samples, or in locations where the estimated model error is largest. This algorithm uses QHull, which is very slow for high dimensions, so you should only use this sample selector for less than 6D and for less than 1000 samples. | |
<source xmlns:saxon="http://icl.com/saxon" lang="xml"> | <source xmlns:saxon="http://icl.com/saxon" lang="xml"> | ||
− | <[[Config:SampleSelector|SampleSelector]] type="[[SampleSelector# | + | <[[Config:SampleSelector|SampleSelector]] type="[[SampleSelector#PipelineSampleSelector|PipelineSampleSelector]]" combineOutputs="false"> |
− | <[[Config: | + | |
− | + | <[[Config:CandidateGenerator|CandidateGenerator]] type="[[CandidateGenerator#DelaunayCandidateGenerator|DelaunayCandidateGenerator]]"/> | |
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− | + | <[[Config:CandidateRanker|CandidateRanker]] type="[[CandidateRanker#modelDifference|modelDifference]]"> | |
− | + | <Option key="criterion_parameter" value="2"/> | |
− | + | </[[Config:CandidateRanker|CandidateRanker]]> | |
− | + | <[[Config:CandidateRanker|CandidateRanker]] type="[[CandidateRanker#delaunayVolume|delaunayVolume]]"/> | |
− | + | ||
− | + | <[[Config:MergeCriterion|MergeCriterion]] type="[[MergeCriterion#WeightedAverage|WeightedAverage]]" weights="[1 1]"/> | |
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</[[Config:SampleSelector|SampleSelector]]> | </[[Config:SampleSelector|SampleSelector]]> | ||
</source> | </source> | ||
=== density === | === density === | ||
− | A | + | A space-filling sampling algorithm which uses an approximation of the Voronoi tessellation of the design space. Will only sample within the "allowed" areas if constraints are specified. |
<source xmlns:saxon="http://icl.com/saxon" lang="xml"> | <source xmlns:saxon="http://icl.com/saxon" lang="xml"> | ||
− | <[[Config:SampleSelector|SampleSelector]] type="[[SampleSelector# | + | <[[Config:SampleSelector|SampleSelector]] type="[[SampleSelector#VoronoiSampleRanker|VoronoiSampleRanker]]" combineOutputs="false"/> |
</source> | </source> | ||
=== error === | === error === | ||
− | An adaptive sample selection algorithm (error based), driven by the evaluation of your model on a dense grid. | + | An adaptive sample selection algorithm (error based), driven by the evaluation of your model on a dense grid, which selects samples in locations where the model error is estimated to be the largest. |
<source xmlns:saxon="http://icl.com/saxon" lang="xml"> | <source xmlns:saxon="http://icl.com/saxon" lang="xml"> | ||
− | <[[Config:SampleSelector|SampleSelector]] type="[[SampleSelector# | + | <[[Config:SampleSelector|SampleSelector]] type="[[SampleSelector#PipelineSampleSelector|PipelineSampleSelector]]" combineOutputs="false"> |
− | + | ||
− | < | + | <[[Config:CandidateGenerator|CandidateGenerator]] type="[[CandidateGenerator#GridCandidateGenerator|GridCandidateGenerator]]"/> |
− | + | ||
− | < | + | <[[Config:CandidateRanker|CandidateRanker]] type="[[CandidateRanker#modelDifference|modelDifference]]"> |
− | + | <Option key="criterion_parameter" value="4"/> | |
− | + | </[[Config:CandidateRanker|CandidateRanker]]> | |
− | + | ||
− | + | <[[Config:MergeCriterion|MergeCriterion]] type="[[MergeCriterion#ClosenessThreshold|ClosenessThreshold]]"> | |
− | <!-- Closeness threshold, Double --> | + | |
− | + | <!-- Closeness threshold, Double --> | |
− | + | <Option key="closenessThreshold" value="0.05"/> | |
− | + | <!-- Set a % of the maximumSamples to randomly chosen --> | |
+ | <Option key="randomPercentage" value="20"/> | ||
+ | |||
+ | <Option key="debug" value="off"/> | ||
+ | </[[Config:MergeCriterion|MergeCriterion]]> | ||
</[[Config:SampleSelector|SampleSelector]]> | </[[Config:SampleSelector|SampleSelector]]> | ||
</source> | </source> | ||
− | === | + | === lola-voronoi === |
− | A highly adaptive sampling algorithm, | + | A highly adaptive sampling algorithm which performs a trade-off between exploration (filling up the design space as equally as possible) and exploitation (selecting data points in highly nonlinear regions). lola-voronoi is the only sample selector which currently supports multiple outputs, auto-sampled inputs and constraints. |
<source xmlns:saxon="http://icl.com/saxon" lang="xml"> | <source xmlns:saxon="http://icl.com/saxon" lang="xml"> | ||
− | <[[Config:SampleSelector|SampleSelector]] type="[[SampleSelector# | + | <[[Config:SampleSelector|SampleSelector]] type="[[SampleSelector#LOLAVoronoiSampleSelector|LOLAVoronoiSampleSelector]]" combineOutputs="false"> |
<!-- Integer between 2 and 20 --> | <!-- Integer between 2 and 20 --> | ||
<Option key="neighbourhoodSize" value="2"/> | <Option key="neighbourhoodSize" value="2"/> | ||
+ | <!-- Number of frequency values returned for each submitted sample. Only used with auto-sampled inputs. --> | ||
+ | <Option key="frequencies" value="11"/> | ||
</[[Config:SampleSelector|SampleSelector]]> | </[[Config:SampleSelector|SampleSelector]]> | ||
</source> | </source> | ||
− | === | + | === rationalPoleSupression === |
− | A sampling algorithm aimed at | + | A sampling algorithm aimed at supressing poles in rational models by sampling them (only for Rational models) |
<source xmlns:saxon="http://icl.com/saxon" lang="xml"> | <source xmlns:saxon="http://icl.com/saxon" lang="xml"> | ||
− | <[[Config:SampleSelector|SampleSelector]] type="[[SampleSelector# | + | <[[Config:SampleSelector|SampleSelector]] type="[[SampleSelector#OptimizeCriterion|OptimizeCriterion]]" combineOutputs="false"> |
− | |||
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− | <!-- | + | <!-- This criterion has to be solved to choose new samples, one can choose the optimizer used here --> |
− | + | <[[Config:Optimizer|Optimizer]]>patternsearch</[[Config:Optimizer|Optimizer]]> | |
− | |||
− | |||
− | |||
− | < | ||
− | |||
− | < | + | <[[Config:CandidateRanker|CandidateRanker]] type="[[CandidateRanker#rationalPoleSupression|rationalPoleSupression]]" scaling="none"/> |
− | < | + | <[[Config:CandidateRanker|CandidateRanker]] type="[[CandidateRanker#modelDifference|modelDifference]]" scaling="none"/> |
− | |||
− | <!-- | + | <!-- |
− | + | when debug is 'on' a contour plot of the criterion function is drawn every iteration. | |
− | + | Together with the current samples and the chosen samples | |
− | + | --> | |
− | + | <Option key="debug" value="off"/> | |
+ | </[[Config:SampleSelector|SampleSelector]]> | ||
+ | </source> | ||
+ | === expectedImprovement === | ||
+ | A sampling algorithm aimed at optimization problems (only for Kriging and RBF) | ||
+ | <source xmlns:saxon="http://icl.com/saxon" lang="xml"> | ||
+ | <[[Config:SampleSelector|SampleSelector]] type="[[SampleSelector#OptimizeCriterion|OptimizeCriterion]]" combineOutputs="false"> | ||
<!-- This criterion has to be solved to choose new samples, one can choose the optimizer used here --> | <!-- This criterion has to be solved to choose new samples, one can choose the optimizer used here --> | ||
− | <[[Config:Optimizer|Optimizer]] | + | <[[Config:Optimizer|Optimizer]]>patternsearch</[[Config:Optimizer|Optimizer]]> |
− | + | ||
− | + | <[[Config:CandidateRanker|CandidateRanker]] type="[[CandidateRanker#expectedImprovement|expectedImprovement]]" scaling="none"> | |
− | </[[Config: | + | </[[Config:CandidateRanker|CandidateRanker]]> |
− | + | <[[Config:CandidateRanker|CandidateRanker]] type="[[CandidateRanker#maxvar|maxvar]]" scaling="none"/> | |
− | |||
− | <[[Config: | ||
− | |||
− | |||
<!-- | <!-- | ||
− | when debug is 'on' a contour plot of the | + | when debug is 'on' a contour plot of the criterion function is drawn every iteration. |
Together with the current samples and the chosen samples | Together with the current samples and the chosen samples | ||
--> | --> | ||
− | <Option key="debug" value=" | + | <Option key="debug" value="off"/> |
+ | </[[Config:SampleSelector|SampleSelector]]> | ||
+ | </source> | ||
+ | === extremaLOLA === | ||
+ | LOLA-Voronoi sample selector supplemented with 1 sample at the minimum and maximum | ||
+ | <source xmlns:saxon="http://icl.com/saxon" lang="xml"> | ||
+ | <[[Config:SampleSelector|SampleSelector]] type="[[SampleSelector#CombinedSampleSelector|CombinedSampleSelector]]" combineOutputs="false"> | ||
+ | <!-- A highly adaptive sampling algorithm, error and density based --> | ||
+ | <[[Config:SampleSelector|SampleSelector]] weight="0.8">lola-voronoi</[[Config:SampleSelector|SampleSelector]]> | ||
+ | <[[Config:SampleSelector|SampleSelector]] weight="0.1">sampleMinimum</[[Config:SampleSelector|SampleSelector]]> | ||
+ | <[[Config:SampleSelector|SampleSelector]] weight="0.1">sampleMaximum</[[Config:SampleSelector|SampleSelector]]> | ||
+ | |||
+ | <[[Config:MergeCriterion|MergeCriterion]] type="[[MergeCriterion#ClosenessThreshold|ClosenessThreshold]]"> | ||
+ | |||
+ | <!-- Closeness threshold, Double --> | ||
+ | <Option key="closenessThreshold" value="0.05"/> | ||
+ | <!-- Set a % of the maximumSamples to randomly chosen --> | ||
+ | <Option key="randomPercentage" value="0"/> | ||
+ | |||
+ | <Option key="debug" value="off"/> | ||
+ | </[[Config:MergeCriterion|MergeCriterion]]> | ||
+ | </[[Config:SampleSelector|SampleSelector]]> | ||
+ | </source> | ||
+ | === sampleMinimum === | ||
+ | Selects one sample at the minimum of the model. | ||
+ | <source xmlns:saxon="http://icl.com/saxon" lang="xml"> | ||
+ | <[[Config:SampleSelector|SampleSelector]] type="[[SampleSelector#OptimizeCriterion|OptimizeCriterion]]" combineOutputs="false"> | ||
+ | <[[Config:Optimizer|Optimizer]]>patternsearch</[[Config:Optimizer|Optimizer]]> | ||
+ | <[[Config:CandidateRanker|CandidateRanker]] type="[[CandidateRanker#minmodel|minmodel]]" scaling="none"/> | ||
+ | </[[Config:SampleSelector|SampleSelector]]> | ||
+ | </source> | ||
+ | === sampleMaximum === | ||
+ | Selects one sample at the maximum of the model. | ||
+ | <source xmlns:saxon="http://icl.com/saxon" lang="xml"> | ||
+ | <[[Config:SampleSelector|SampleSelector]] type="[[SampleSelector#OptimizeCriterion|OptimizeCriterion]]" combineOutputs="false"> | ||
+ | <[[Config:Optimizer|Optimizer]]>patternsearch</[[Config:Optimizer|Optimizer]]> | ||
+ | <[[Config:CandidateRanker|CandidateRanker]] type="[[CandidateRanker#maxmodel|maxmodel]]" scaling="none"/> | ||
+ | </[[Config:SampleSelector|SampleSelector]]> | ||
+ | </source> | ||
+ | === default === | ||
+ | LOLA sample selector combined with error based sample selector | ||
+ | <source xmlns:saxon="http://icl.com/saxon" lang="xml"> | ||
+ | <[[Config:SampleSelector|SampleSelector]] type="[[SampleSelector#CombinedSampleSelector|CombinedSampleSelector]]" combineOutputs="false"> | ||
+ | <[[Config:SampleSelector|SampleSelector]] weight="0.7">lola-voronoi</[[Config:SampleSelector|SampleSelector]]> | ||
+ | <[[Config:SampleSelector|SampleSelector]] weight="0.3">error</[[Config:SampleSelector|SampleSelector]]> | ||
+ | |||
+ | <[[Config:MergeCriterion|MergeCriterion]] type="[[MergeCriterion#ClosenessThreshold|ClosenessThreshold]]"> | ||
+ | <!-- Closeness threshold, Double --> | ||
+ | <Option key="closenessThreshold" value="0.05"/> | ||
+ | <!-- Set a % of the maximumSamples to randomly chosen --> | ||
+ | <Option key="randomPercentage" value="0"/> | ||
+ | |||
+ | <Option key="debug" value="off"/> | ||
+ | </[[Config:MergeCriterion|MergeCriterion]]> | ||
</[[Config:SampleSelector|SampleSelector]]> | </[[Config:SampleSelector|SampleSelector]]> | ||
</source> | </source> |
Latest revision as of 16:23, 27 February 2014
Generated for SUMO toolbox version 7.0. We are well aware that documentation is not always complete and possibly even out of date in some cases. We try to document everything as best we can but much is limited by available time and manpower. We are are a university research group after all. The most up to date documentation can always be found (if not here) in the default.xml configuration file and, of course, in the source files. If something is unclear please dont hesitate to ask.
SampleSelector
empty
Don't select any new samples, useful when modeling multiple outputs, and you don't want to involve one of these outputs in the sampling process.
<[[Config:SampleSelector|SampleSelector]] type="[[SampleSelector#EmptySampleSelector|EmptySampleSelector]]" combineOutputs="false"/>
random
Selects new samples randomly in the design space.
<[[Config:SampleSelector|SampleSelector]] type="[[SampleSelector#RandomSampleSelector|RandomSampleSelector]]" combineOutputs="false"/>
delaunay
This sample selector uses a Delaunay triangulation of the data to select samples in locations far from previous samples, or in locations where the estimated model error is largest. This algorithm uses QHull, which is very slow for high dimensions, so you should only use this sample selector for less than 6D and for less than 1000 samples.
<[[Config:SampleSelector|SampleSelector]] type="[[SampleSelector#PipelineSampleSelector|PipelineSampleSelector]]" combineOutputs="false">
<[[Config:CandidateGenerator|CandidateGenerator]] type="[[CandidateGenerator#DelaunayCandidateGenerator|DelaunayCandidateGenerator]]"/>
<[[Config:CandidateRanker|CandidateRanker]] type="[[CandidateRanker#modelDifference|modelDifference]]">
<Option key="criterion_parameter" value="2"/>
</[[Config:CandidateRanker|CandidateRanker]]>
<[[Config:CandidateRanker|CandidateRanker]] type="[[CandidateRanker#delaunayVolume|delaunayVolume]]"/>
<[[Config:MergeCriterion|MergeCriterion]] type="[[MergeCriterion#WeightedAverage|WeightedAverage]]" weights="[1 1]"/>
</[[Config:SampleSelector|SampleSelector]]>
density
A space-filling sampling algorithm which uses an approximation of the Voronoi tessellation of the design space. Will only sample within the "allowed" areas if constraints are specified.
<[[Config:SampleSelector|SampleSelector]] type="[[SampleSelector#VoronoiSampleRanker|VoronoiSampleRanker]]" combineOutputs="false"/>
error
An adaptive sample selection algorithm (error based), driven by the evaluation of your model on a dense grid, which selects samples in locations where the model error is estimated to be the largest.
<[[Config:SampleSelector|SampleSelector]] type="[[SampleSelector#PipelineSampleSelector|PipelineSampleSelector]]" combineOutputs="false">
<[[Config:CandidateGenerator|CandidateGenerator]] type="[[CandidateGenerator#GridCandidateGenerator|GridCandidateGenerator]]"/>
<[[Config:CandidateRanker|CandidateRanker]] type="[[CandidateRanker#modelDifference|modelDifference]]">
<Option key="criterion_parameter" value="4"/>
</[[Config:CandidateRanker|CandidateRanker]]>
<[[Config:MergeCriterion|MergeCriterion]] type="[[MergeCriterion#ClosenessThreshold|ClosenessThreshold]]">
<!-- Closeness threshold, Double -->
<Option key="closenessThreshold" value="0.05"/>
<!-- Set a % of the maximumSamples to randomly chosen -->
<Option key="randomPercentage" value="20"/>
<Option key="debug" value="off"/>
</[[Config:MergeCriterion|MergeCriterion]]>
</[[Config:SampleSelector|SampleSelector]]>
lola-voronoi
A highly adaptive sampling algorithm which performs a trade-off between exploration (filling up the design space as equally as possible) and exploitation (selecting data points in highly nonlinear regions). lola-voronoi is the only sample selector which currently supports multiple outputs, auto-sampled inputs and constraints.
<[[Config:SampleSelector|SampleSelector]] type="[[SampleSelector#LOLAVoronoiSampleSelector|LOLAVoronoiSampleSelector]]" combineOutputs="false">
<!-- Integer between 2 and 20 -->
<Option key="neighbourhoodSize" value="2"/>
<!-- Number of frequency values returned for each submitted sample. Only used with auto-sampled inputs. -->
<Option key="frequencies" value="11"/>
</[[Config:SampleSelector|SampleSelector]]>
rationalPoleSupression
A sampling algorithm aimed at supressing poles in rational models by sampling them (only for Rational models)
<[[Config:SampleSelector|SampleSelector]] type="[[SampleSelector#OptimizeCriterion|OptimizeCriterion]]" combineOutputs="false">
<!-- This criterion has to be solved to choose new samples, one can choose the optimizer used here -->
<[[Config:Optimizer|Optimizer]]>patternsearch</[[Config:Optimizer|Optimizer]]>
<[[Config:CandidateRanker|CandidateRanker]] type="[[CandidateRanker#rationalPoleSupression|rationalPoleSupression]]" scaling="none"/>
<[[Config:CandidateRanker|CandidateRanker]] type="[[CandidateRanker#modelDifference|modelDifference]]" scaling="none"/>
<!--
when debug is 'on' a contour plot of the criterion function is drawn every iteration.
Together with the current samples and the chosen samples
-->
<Option key="debug" value="off"/>
</[[Config:SampleSelector|SampleSelector]]>
expectedImprovement
A sampling algorithm aimed at optimization problems (only for Kriging and RBF)
<[[Config:SampleSelector|SampleSelector]] type="[[SampleSelector#OptimizeCriterion|OptimizeCriterion]]" combineOutputs="false">
<!-- This criterion has to be solved to choose new samples, one can choose the optimizer used here -->
<[[Config:Optimizer|Optimizer]]>patternsearch</[[Config:Optimizer|Optimizer]]>
<[[Config:CandidateRanker|CandidateRanker]] type="[[CandidateRanker#expectedImprovement|expectedImprovement]]" scaling="none">
</[[Config:CandidateRanker|CandidateRanker]]>
<[[Config:CandidateRanker|CandidateRanker]] type="[[CandidateRanker#maxvar|maxvar]]" scaling="none"/>
<!--
when debug is 'on' a contour plot of the criterion function is drawn every iteration.
Together with the current samples and the chosen samples
-->
<Option key="debug" value="off"/>
</[[Config:SampleSelector|SampleSelector]]>
extremaLOLA
LOLA-Voronoi sample selector supplemented with 1 sample at the minimum and maximum
<[[Config:SampleSelector|SampleSelector]] type="[[SampleSelector#CombinedSampleSelector|CombinedSampleSelector]]" combineOutputs="false">
<!-- A highly adaptive sampling algorithm, error and density based -->
<[[Config:SampleSelector|SampleSelector]] weight="0.8">lola-voronoi</[[Config:SampleSelector|SampleSelector]]>
<[[Config:SampleSelector|SampleSelector]] weight="0.1">sampleMinimum</[[Config:SampleSelector|SampleSelector]]>
<[[Config:SampleSelector|SampleSelector]] weight="0.1">sampleMaximum</[[Config:SampleSelector|SampleSelector]]>
<[[Config:MergeCriterion|MergeCriterion]] type="[[MergeCriterion#ClosenessThreshold|ClosenessThreshold]]">
<!-- Closeness threshold, Double -->
<Option key="closenessThreshold" value="0.05"/>
<!-- Set a % of the maximumSamples to randomly chosen -->
<Option key="randomPercentage" value="0"/>
<Option key="debug" value="off"/>
</[[Config:MergeCriterion|MergeCriterion]]>
</[[Config:SampleSelector|SampleSelector]]>
sampleMinimum
Selects one sample at the minimum of the model.
<[[Config:SampleSelector|SampleSelector]] type="[[SampleSelector#OptimizeCriterion|OptimizeCriterion]]" combineOutputs="false">
<[[Config:Optimizer|Optimizer]]>patternsearch</[[Config:Optimizer|Optimizer]]>
<[[Config:CandidateRanker|CandidateRanker]] type="[[CandidateRanker#minmodel|minmodel]]" scaling="none"/>
</[[Config:SampleSelector|SampleSelector]]>
sampleMaximum
Selects one sample at the maximum of the model.
<[[Config:SampleSelector|SampleSelector]] type="[[SampleSelector#OptimizeCriterion|OptimizeCriterion]]" combineOutputs="false">
<[[Config:Optimizer|Optimizer]]>patternsearch</[[Config:Optimizer|Optimizer]]>
<[[Config:CandidateRanker|CandidateRanker]] type="[[CandidateRanker#maxmodel|maxmodel]]" scaling="none"/>
</[[Config:SampleSelector|SampleSelector]]>
default
LOLA sample selector combined with error based sample selector
<[[Config:SampleSelector|SampleSelector]] type="[[SampleSelector#CombinedSampleSelector|CombinedSampleSelector]]" combineOutputs="false">
<[[Config:SampleSelector|SampleSelector]] weight="0.7">lola-voronoi</[[Config:SampleSelector|SampleSelector]]>
<[[Config:SampleSelector|SampleSelector]] weight="0.3">error</[[Config:SampleSelector|SampleSelector]]>
<[[Config:MergeCriterion|MergeCriterion]] type="[[MergeCriterion#ClosenessThreshold|ClosenessThreshold]]">
<!-- Closeness threshold, Double -->
<Option key="closenessThreshold" value="0.05"/>
<!-- Set a % of the maximumSamples to randomly chosen -->
<Option key="randomPercentage" value="0"/>
<Option key="debug" value="off"/>
</[[Config:MergeCriterion|MergeCriterion]]>
</[[Config:SampleSelector|SampleSelector]]>